PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY33220.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 1105aa MW: 122160 Da PI: 6.9614

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY33220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.6	1.2e-23	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k+lt sd++++g +++p++ ae++ + +++ ++++ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F ++++++l TEY33220.1 132 FCKTLTASDTSTHGGFSVPRRAAEKIfptldfsM-QPPA-QEIVARDLHETVWTFRHIFRGQPKRHLLTSGWSLFVNAKRLVAGDSVLFI--RDEKQQL 226 99***************************954.4444.48********************************************..5688889 PP EEEEE-S CS B3 93 vvkvfrk 99 +++++r+ TEY33220.1 227 LLGIRRA 233 **997 PP
2	Auxin_resp	115.2	5.8e-38	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekve.kalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+v+YnPr+s+seFv++++k+ +a+++++s+GmRf+m+fet++s +rr++Gt++g+sdldpvrW+nS+Wr+L+ TEY33220.1 258 AAHAAANSSPFTVFYNPRSSPSEFVIPLAKYYrAACSSQISLGMRFRMMFETDESGTRRYMGTITGISDLDPVRWKNSQWRNLQ 341 79************************997615678*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1105 aa Download sequence
MKAANTGSGA PPPNASAAEG EKKSINGELW QACAGPLANL PAAGTHVVYF PQGHSEQVAA 60 SMRKDANAQI PNYPNLPSKL ICLLHNVTLH ADPETDEVYA QMTLQPVPSF DQDALLRSDL 120 SMKVNKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPT LDFSMQPPAQ EIVARDLHET 180 VWTFRHIFRG QPKRHLLTSG WSLFVNAKRL VAGDSVLFIR DEKQQLLLGI RRANRQPANL 240 SSSVLSSDSM HIGVLAAAAH AAANSSPFTV FYNPRSSPSE FVIPLAKYYR AACSSQISLG 300 MRFRMMFETD ESGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG ERRSRVSIWE 360 IEPITAPFFI CPTPPFLRTK FPRQPGMPGK ELYNDSSDFE SLFRRSMPWP GDEFGLKDSQ 420 ALPGLSLVQW MNMQQNSSMT NPTQSNYINH LPGSVLQNFG GSDISRQLGL PMTQVPHQHN 480 LQHSAQRPTE SVQQQDQLKS TLNNIRSTIQ PQQQLTDVTH SSRQSLGGQT LPTSQVQSQN 540 PIETQNVLQH QQSLLSHQLQ RNLPQNLPQQ QQQQQQQQIL AHSQQQNPDH TSQQQQHMSD 600 NQVKLQLLQK LHQQQQSLLA QQSGLQHSSH LTQLQDQQKQ LLETPPNLSR SMKTSQMSDS 660 SQASGMHSQS HGTGQQMVRS NSQSNLLRCT QLPQKPKLQQ QQQQSGMLSD FPGHVGGALK 720 PITNQLSARS NGLLTAATGG FQAAVTDDVS SCSTSVSTNN CRNAVQTVIN GRNHHSTTLG 780 DEIAQSSASL LNQSGLEQMS SNGHIVKDLH QKSDVKPSMN VFKNQNHGFI GSQTFHDGAG 840 TQIDYLDSSS SVTSVFPQNE GQIPQNNSMT FNSQSLFFRD ASQDGEVLGD PRSNIPFGTD 900 IDNQLDMPLI LNQLVTKDMV GSGKDFANNL SSGEGVLPTY ENPKDAQPVH SSSMVSQPFG 960 VPDVAFNSID SNVNDGGFVN RGSWAAPHVP RMRTYTKVYK RGAVGRSIDI SHYSGYDELK 1020 QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DVLLVGDDPW EEFVSCVRCI KILSPQEVQQ 1080 MSLDGDFGDN VLPNQVCSSS DNAVN

Sequence ? help Back to Top

Protein Sequence Length: 1105 aa Download sequence

MKAANTGSGA PPPNASAAEG EKKSINGELW QACAGPLANL PAAGTHVVYF PQGHSEQVAA  60
SMRKDANAQI PNYPNLPSKL ICLLHNVTLH ADPETDEVYA QMTLQPVPSF DQDALLRSDL  120
SMKVNKPQTE FFCKTLTASD TSTHGGFSVP RRAAEKIFPT LDFSMQPPAQ EIVARDLHET  180
VWTFRHIFRG QPKRHLLTSG WSLFVNAKRL VAGDSVLFIR DEKQQLLLGI RRANRQPANL  240
SSSVLSSDSM HIGVLAAAAH AAANSSPFTV FYNPRSSPSE FVIPLAKYYR AACSSQISLG  300
MRFRMMFETD ESGTRRYMGT ITGISDLDPV RWKNSQWRNL QVGWDESTAG ERRSRVSIWE  360
IEPITAPFFI CPTPPFLRTK FPRQPGMPGK ELYNDSSDFE SLFRRSMPWP GDEFGLKDSQ  420
ALPGLSLVQW MNMQQNSSMT NPTQSNYINH LPGSVLQNFG GSDISRQLGL PMTQVPHQHN  480
LQHSAQRPTE SVQQQDQLKS TLNNIRSTIQ PQQQLTDVTH SSRQSLGGQT LPTSQVQSQN  540
PIETQNVLQH QQSLLSHQLQ RNLPQNLPQQ QQQQQQQQIL AHSQQQNPDH TSQQQQHMSD  600
NQVKLQLLQK LHQQQQSLLA QQSGLQHSSH LTQLQDQQKQ LLETPPNLSR SMKTSQMSDS  660
SQASGMHSQS HGTGQQMVRS NSQSNLLRCT QLPQKPKLQQ QQQQSGMLSD FPGHVGGALK  720
PITNQLSARS NGLLTAATGG FQAAVTDDVS SCSTSVSTNN CRNAVQTVIN GRNHHSTTLG  780
DEIAQSSASL LNQSGLEQMS SNGHIVKDLH QKSDVKPSMN VFKNQNHGFI GSQTFHDGAG  840
TQIDYLDSSS SVTSVFPQNE GQIPQNNSMT FNSQSLFFRD ASQDGEVLGD PRSNIPFGTD  900
IDNQLDMPLI LNQLVTKDMV GSGKDFANNL SSGEGVLPTY ENPKDAQPVH SSSMVSQPFG  960
VPDVAFNSID SNVNDGGFVN RGSWAAPHVP RMRTYTKVYK RGAVGRSIDI SHYSGYDELK  1020
QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DVLLVGDDPW EEFVSCVRCI KILSPQEVQQ  1080
MSLDGDFGDN VLPNQVCSSS DNAVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein