PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY33804.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 226aa    MW: 26618.2 Da    PI: 10.5695
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY33804.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF47.22.9e-151153345
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                ie +  r+vtf kR++g++ K +E  +LCd+++++ii++++++
  TEY33804.1 11 IEKEKSRNVTFKKRKEGLIRKLSEFTTLCDVKACMIIYGPNQT 53
                89999***********************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MGRAKLKMEL IEKEKSRNVT FKKRKEGLIR KLSEFTTLCD VKACMIIYGP NQTRPEIWPP  60
QNPEQVRRII DLYKSKNSGS VKSFGVVNFF KERKKQIEDE LKKLKRKNQE AKYPTRPELL  120
NVINEHQLRQ LHAALTNKAQ CVKSRIELLK MKQTEQQLMN PMLMDHRRLH PNPMMMGIGS  180
SNSANMQMQR QFYYESATGF YQPYSQYMVQ PQLPPLPPQM QFLGNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.19e-21M-type_MADS family protein