PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35096.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 172aa MW: 19337.1 Da PI: 5.998

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.3	1.3e-43	16	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++Cvlapyfp ++p+kfa++h++FGasn++kll+++pe++r da++s+vyeA+ar+rdP+yG+vg+i +lq+q+++l+aela+ ++ TEY35096.1 16 PCAACKTLRRRCADKCVLAPYFPPNEPHKFAIAHRIFGASNIIKLLQEIPEDQRGDAVTSMVYEAKARLRDPIYGCVGTICHLQKQVDELQAELARSQA 114 7**********************************************************************************************9987 PP DUF260 100 e 100 e TEY35096.1 115 E 115 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 172 aa Download sequence
MHRPNTISAT MAILTPCAAC KTLRRRCADK CVLAPYFPPN EPHKFAIAHR IFGASNIIKL 60 LQEIPEDQRG DAVTSMVYEA KARLRDPIYG CVGTICHLQK QVDELQAELA RSQAEVLNIQ 120 CQNANLVDQF CKNMETKEVN ENSSPLDDEM QYHGNPTLFF DEGIMGNSPL WT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	3e-66	LBD family protein