PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY35104.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 201aa MW: 22124.1 Da PI: 8.3956

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY35104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.6	1.4e-45	9	108	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +l+ +k+ TEY35104.1 9 PCAACKFLRRKCLPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELQPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKS 107 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY35104.1 108 E 108 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MASSSTTSPC AACKFLRRKC LPECVFAPYF PPDQPQKFAN VHKVFGASNV TKLLNELQPH 60 QREDAVNSLA YEADMRLRDP VYGCVGVISL LQHQLRQLQM DLSCAKSELS KYQNLGISGH 120 GLLHHHQGIT NLARDHHHFH HQLFPVTNQQ MIRAFDGGSG YDASSLLSMN MSASIGQLGG 180 FQQSRAAGPA TDGRRTPVEP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-73	LBD family protein