PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY35296.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 173aa    MW: 18883.6 Da    PI: 7.0137
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY35296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260135.22.5e-42131131101
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+lrr+Ca++C+++pyf  ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r+rdPvyG++g i++lqqq++ l+ael+++++
  TEY35296.1  13 PCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQVLQAELDAVRN 111
                 7***********************************************************************************************998 PP

      DUF260 100 el 101
                 e+
  TEY35296.1 112 EI 113
                 75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MLGHTGTLNT TTPCAACKLL RRRCAQECPF SPYFSPHEPH KFASVHKVFG ASNVSKMLME  60
VPESQRADAA NSLVYEANVR LRDPVYGCMG AISSLQQQVQ VLQAELDAVR NEILKYKYKL  120
EESNMLPSSH VSLLSSEGVS VAAPPPSPPP PPPPPPFPPD FSNISNESIT YFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40470.11e-69LBD family protein