PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY35562.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 258aa    MW: 29226.9 Da    PI: 8.909
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY35562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.13e-086185126
                --S---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                yk e C+ f+  G C yG++C+FaH 
  TEY35562.1 61 YKSEMCNLFQM-GKCYYGENCHFAHN 85
                899****8888.*************7 PP
2zf-CCCH29.81e-09152179127
                 --S---SGGG.GTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffa.rtGtCkyGdrCkFaHgp 27 
                 ykt+lC +++ r+G C+yG++C++aHg+
  TEY35562.1 152 YKTKLCARWLeRFGSCPYGEKCTYAHGK 179
                 9********83578************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MNPNDDSQIS GQVNFGGKIA YDHRPQPRNP NHQQPFSDHG FKRPRPRTPL TVNRSKLSIP  60
YKSEMCNLFQ MGKCYYGENC HFAHNLRQLR GLEGVAMAEP FSERRRFFSG GRGCIYHPYQ  120
SVGRDDGGLN RESGRGGGDS IECRGLSGRW HYKTKLCARW LERFGSCPYG EKCTYAHGKE  180
GELQLPGYYA ELVRRRDSRS MLDSLPTFAG LCKMGIETAK EEGGVHVMKW DIEKISEVYA  240
DWVGVGHDFH VSLSAVGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14246KRPRP