PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY36013.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 172aa    MW: 19079.6 Da    PI: 7.2739
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY36013.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260122.22.8e-3891091100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +++fa++hk+FGasnv+kll++lp ++r +a+ +++yeA+ar++dP+yG+v++i++lqqq+ +l+a++a lk
  TEY36013.1   9 PCGACKFLRRKCVRGCVFAPYFWHEQgAAHFAAIHKVFGASNVSKLLAHLPVSHRCEAALTIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQVACLK 107
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 e+
  TEY36013.1 108 EQ 109
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MNMTGTSSPC GACKFLRRKC VRGCVFAPYF WHEQGAAHFA AIHKVFGASN VSKLLAHLPV  60
SHRCEAALTI AYEAQARLQD PIYGCVSHIF ALQQQVVNLQ AQVACLKEQA AHSIITAANP  120
NGKFYPDLPQ NQGYLGGENS GFVEENNESF GSEMQWPFQD DLHSVPFRYI HH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58190.16e-56LBD family protein