PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36220.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 357aa MW: 39439.9 Da PI: 7.9664

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.4	3e-24	89	133	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TEY36220.1 89 DPEPGRCRRTDGKKWRCSKDAHPDSKYCERHMHRGRNRSRKHVES 133 79****************************************986 PP
2	QLQ	46.1	1.5e-16	20	51	2	33
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlq 33 +FT Ql +L++Q+ +yKyL+a++P+Pp+L+ TEY36220.1 20 PFTQVQLKELEQQAIVYKYLVAGLPMPPDLVR 51 9*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MSEKAVTTAE LGYGGYRAPP FTQVQLKELE QQAIVYKYLV AGLPMPPDLV RLFRHSSDGL 60 PACVFNQPAC NLSFFYDLNY CSYYGKKFDP EPGRCRRTDG KKWRCSKDAH PDSKYCERHM 120 HRGRNRSRKH VESQPTSQSL LTAVPHSSNG GGIDRGSSQQ VPLYSGANPK GLFVGSNASK 180 LYMGPYGISG REFSFSHEAS GRAGGVDLGP SAGCGTWTLT PSHVSSSSLF KQGSDSRYLA 240 TSSAQQYMTH AFEPMNASLP KQQQHGLFGS DFSSATTLKQ EHLFFSEWPT TKESWSNLDN 300 DGSSQSTFTS TQLSMSIPRA SSDFALGTAY STNGEPEFFS LLMDDERYER QIICPCF

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MSEKAVTTAE LGYGGYRAPP FTQVQLKELE QQAIVYKYLV AGLPMPPDLV RLFRHSSDGL  60
PACVFNQPAC NLSFFYDLNY CSYYGKKFDP EPGRCRRTDG KKWRCSKDAH PDSKYCERHM  120
HRGRNRSRKH VESQPTSQSL LTAVPHSSNG GGIDRGSSQQ VPLYSGANPK GLFVGSNASK  180
LYMGPYGISG REFSFSHEAS GRAGGVDLGP SAGCGTWTLT PSHVSSSSLF KQGSDSRYLA  240
TSSAQQYMTH AFEPMNASLP KQQQHGLFGS DFSSATTLKQ EHLFFSEWPT TKESWSNLDN  300
DGSSQSTFTS TQLSMSIPRA SSDFALGTAY STNGEPEFFS LLMDDERYER QIICPCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-36	GRF family protein