PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY36490.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 210aa MW: 23062.7 Da PI: 7.9808

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY36490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00039	73	95	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++Fs+ L H +H TEY36490.1 73 YECKTCTRTFSSFQALGGHRASH 95 99**********99999998887 PP
2	zf-C2H2	14.3	0.00012	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H TEY36490.1 137 HECSICGSEFSSGQALGGHMRRH 159 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MKELSTSNDH IIAKGKRTKR PRPSSSASAS DVTSNFSPTT STGISTSTEE DEDLANCLIL 60 LACGNRKDSI NVYECKTCTR TFSSFQALGG HRASHKKPKP AAQFNPPPEK DESEEEAESK 120 FVKINTITLS PSRPKIHECS ICGSEFSSGQ ALGGHMRRHR SCHNTARCGD DHQKARNMLS 180 LDLNLPAPIE EAEFHAFSSG QKLRLVDCHY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	19	23	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	5e-39	C2H2 family protein