PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY36530.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 195aa    MW: 22171.2 Da    PI: 5.914
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY36530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.74.6e-212674149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ie+ snr vtfskRr g++KKA+EL+ LC++e+a+i+ s   +++ +
  TEY36530.1 26 KKIESLSNRRVTFSKRRLGLFKKASELCLLCETEIAIIVQSLGKHVHSF 74
                68***************************************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
METEMVMSSE GEKKKKTQGK KKIEIKKIES LSNRRVTFSK RRLGLFKKAS ELCLLCETEI  60
AIIVQSLGKH VHSFGHNSTD AVIDRYLGGG DDHERDAVAP AVNTKELYQH CYSHVLKELE  120
LEKKRRDVAE EGGDVFWWNQ GVEEMELDEM EQFAMALDEL SKKADLRAND LMSSYLQQPL  180
AVASAQNQMG NNLDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.13e-28M-type_MADS family protein