PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY36533.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 230aa    MW: 25793.1 Da    PI: 5.7173
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY36533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.71.3e-222270149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k+ien snrqvtfskRr g++KKA+EL+vLC+ae+a+++ s   +++ +
  TEY36533.1 22 KKIENLSNRQVTFSKRRLGLFKKASELCVLCGAEIAIVVHSLGKRVFSF 70
                68*************************************9987777666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVILKESGGK KTTQGRKKIE IKKIENLSNR QVTFSKRRLG LFKKASELCV LCGAEIAIVV  60
HSLGKRVFSF NHPSTGAVID RYLGGEREFD AAPAVNTREF NRHYSDVSNQ LELEKQRRDL  120
IEEAKRAEGG GEVFWWHQGV EEMELNELEQ YAEALDELLK NVDLRTNDLM ISHLLPSAVA  180
SDDAAAGGLC VAQNQMGNNF DYENFIAPNQ GLDMVGFEGR KTSSPAWLNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-37M-type_MADS family protein