PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37037.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 28344.4 Da PI: 9.9748

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37037.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.3	4.7e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien++nrqvt+skRrng++KKA+EL vLCda++++i++sst+kl+ey+s TEY37037.1 9 KKIENQTNRQVTYSKRRNGLFKKAHELTVLCDAKISIIMISSTQKLHEYIS 59 68***********************************************86 PP
2	K-box	78.5	1.6e-26	71	169	1	99
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 yqk+ ++ +++++e++q++l+kLk+ ++nL e+R++ Ge+L++L ++++ +L +++++s+k iR+kK++++ + i++++kk ++++e+++ L +++ TEY37037.1 71 YQKTVRTDIWSSHYEKMQEHLKKLKEINRNLMMEIRQRRGESLNDLGYEQMVNLIEDMDNSMKVIREKKYKVISSRIDTSRKKLRNVEEIHRGLVLQFD 169 78888899************************************************************************************9988775 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MARGKIQIKK IENQTNRQVT YSKRRNGLFK KAHELTVLCD AKISIIMISS TQKLHEYISP 60 TITTKQIVDE YQKTVRTDIW SSHYEKMQEH LKKLKEINRN LMMEIRQRRG ESLNDLGYEQ 120 MVNLIEDMDN SMKVIREKKY KVISSRIDTS RKKLRNVEEI HRGLVLQFDA RQEDPHYGLV 180 ENEGDYNSML GFPHGGPRII AVRLPPNNHH PHPHHHHHHH HHHPSLHSGT GASDLTTFAL 240 LE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	109	RNLMMEIRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	1e-86	MIKC_MADS family protein