PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37099.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 197aa MW: 22276.8 Da PI: 9.547

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.7	1.3e-18	28	73	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v ++G+++W++I++++ gR++k+c++rw + TEY37099.1 28 KGPWSAEEDKILTRLVDRYGPRNWSLISKYIR-GRSGKSCRLRWCNQ 73 79****************************.*********985 PP
2	Myb_DNA-binding	54.6	2.5e-17	82	124	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ed+ ++ a++++G++ W+tIar ++ gRt++ +k++w++ TEY37099.1 82 PFSPAEDQAILAAHARYGNR-WATIARLLP-GRTDNAVKNHWNST 124 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MDLLNRCSSV SSSSSDSSSD SSTQRRIKGP WSAEEDKILT RLVDRYGPRN WSLISKYIRG 60 RSGKSCRLRW CNQLSPDVQH RPFSPAEDQA ILAAHARYGN RWATIARLLP GRTDNAVKNH 120 WNSTLKRRYQ TQQQPHRCEE EEHDPMTALS LAPPGIGGAA AGDLPAGFWD EMRNVIAREV 180 RDYVTTSFQE TSTGFRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	2e-57	MYB family protein