PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY37266.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 404aa MW: 44443.5 Da PI: 5.4761

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY37266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.9	7.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 +C+ ++e++ + +C+++ lC +C + H+ H++ TEY37266.1 4 RCDFCGEQRSIVYCRSDAASLCLSCDRNVHSAnalskrHSR 44 7*****************************65667777765 PP
2	zf-B_box	25.4	2.9e-08	46	86	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg...Htvvp 41 +C+++++++++ C + ++ lC++C ++H++ H+ ++ TEY37266.1 46 LVCERCNSQPASVRCMEERVSLCHNCDWAGHSSsstHKKQS 86 68*****************************7789998765 PP
3	CCT	60.4	6.2e-21	347	389	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R a++RYkeK+ktRkFeKk+rYe+RKa+A+ R RvKGrF k+ TEY37266.1 347 RSDAVMRYKEKKKTRKFEKKVRYETRKARADVRRRVKGRFIKA 389 889*************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGYRCDFCGE QRSIVYCRSD AASLCLSCDR NVHSANALSK RHSRTLVCER CNSQPASVRC 60 MEERVSLCHN CDWAGHSSSS THKKQSVNCY SGCPSSAELS HIWSFLLDDP SAEGSACKQG 120 MDSMSITDNK LRDCQDNDGS KGVVTLPSET SNLSNVDMDK EADWMELSAS MQNAGLLAGS 180 THSAMRKVYV PREEGIAECK DTEFYDNFNV DEIDLGIENY DELFGAALDN PDRLFDNEDI 240 DGLFGPHDMS FSDCQAAHPT EGSAVGGIKM QPACSNAASA DSVVSCKTEP NICFMRQAHS 300 GFSFSRLTGE SSGVDYQDCG ASPMLNMGDP PWGLPGPESA MPPSSSRSDA VMRYKEKKKT 360 RKFEKKVRYE TRKARADVRR RVKGRFIKAG DAYDYDPLCK SRSC

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGYRCDFCGE QRSIVYCRSD AASLCLSCDR NVHSANALSK RHSRTLVCER CNSQPASVRC  60
MEERVSLCHN CDWAGHSSSS THKKQSVNCY SGCPSSAELS HIWSFLLDDP SAEGSACKQG  120
MDSMSITDNK LRDCQDNDGS KGVVTLPSET SNLSNVDMDK EADWMELSAS MQNAGLLAGS  180
THSAMRKVYV PREEGIAECK DTEFYDNFNV DEIDLGIENY DELFGAALDN PDRLFDNEDI  240
DGLFGPHDMS FSDCQAAHPT EGSAVGGIKM QPACSNAASA DSVVSCKTEP NICFMRQAHS  300
GFSFSRLTGE SSGVDYQDCG ASPMLNMGDP PWGLPGPESA MPPSSSRSDA VMRYKEKKKT  360
RKFEKKVRYE TRKARADVRR RVKGRFIKAG DAYDYDPLCK SRSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-112	CO-like family protein