PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY37477.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 166aa    MW: 18493.3 Da    PI: 9.2341
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY37477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF61.68.8e-201966249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +ie ks  qv f+kRr g++ KA ELS+LC+ae+a+++ s+++kly +
  TEY37477.1 19 KIEKKSSLQVAFTKRRGGLFRKAAELSILCGAEIAILVQSPSQKLYAF 66
                699*******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MENSNGKKTL GRRKIPMRKI EKKSSLQVAF TKRRGGLFRK AAELSILCGA EIAILVQSPS  60
QKLYAFGHPS AAALINRCDD CGCGAAMKMV EAEKRRSTEK EIKEKPYEGL ELHELEGIRT  120
AQDDFGEKVE KTALPLLQEA ASSSNQIKIN DQIIPTYTLD QIWGRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-24M-type_MADS family protein