PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY37949.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Whirly
Protein Properties Length: 279aa    MW: 31179.2 Da    PI: 9.8374
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY37949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly210.51.8e-651002371138
      Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 
                 svyk+kaal+v++++p+f+ l+sg++kl+++G +ll++a+a ++r+ydW++kq+f+ls+te++++++l++++sceffhdp +++s+eG+vrk+lkvePl
  TEY37949.1 100 SVYKGKAALTVEPRAPEFSPLESGAFKLSKEGYVLLQFAPASGVRQYDWSRKQVFSLSVTEIGHIISLGARGSCEFFHDPNKGKSDEGRVRKVLKVEPL 198
                 79************************************************************************************************* PP

      Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsll 138
                 pdGsG+f+nlsv+n++++++e++++P++kaef+vl s +
  TEY37949.1 199 PDGSGHFFNLSVQNKITNVDENIYIPITKAEFTVLVSSF 237
                 ***********************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVIHSLCPPR GGAAISTQQP QKLSAFNSAI PINFVSTRKS SSLFHCPLRY RSKNATFCVK  60
NQYLTPQEQS HQQHKFSPYD SPSQSQPGGQ FPPRVYVGYS VYKGKAALTV EPRAPEFSPL  120
ESGAFKLSKE GYVLLQFAPA SGVRQYDWSR KQVFSLSVTE IGHIISLGAR GSCEFFHDPN  180
KGKSDEGRVR KVLKVEPLPD GSGHFFNLSV QNKITNVDEN IYIPITKAEF TVLVSSFNFV  240
LPYLLGWHTF ANSIKPEDAN RQNSTNATNP RSADFEWTR