PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38238.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 296aa MW: 33363.5 Da PI: 7.6649

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.3	7.4e-27	58	141	3	86
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86 g+kdrhsk++T +g+RdRR+Rls+++a ++++Lq++LG+ ++sk +WLl k i++l+ +++++ + +++++sss+ s TEY38238.1 58 GGKDRHSKVCTVRGLRDRRIRLSIPTAVQLYELQEKLGLSQPSKVFDWLLDVTKSDIDKLPPLPTIPGIFPNPNQDSSSQPPLS 141 78*************************************************************888886665555555555222 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MLTGSVEINF WCRVGHSPSM NSNSKEGEVR VKQEGAARPQ WSSIHKNPRI VCVSRTFGGK 60 DRHSKVCTVR GLRDRRIRLS IPTAVQLYEL QEKLGLSQPS KVFDWLLDVT KSDIDKLPPL 120 PTIPGIFPNP NQDSSSQPPL SQLLSSKIDD ERGKEREKWI EQENQEEGFG GFVAQNLFPL 180 PNTINHQSNF PNFNHNPYFH LDHPNLSLSP FGPNYISQLP NQGYDQSMNN NPSNSHLYFC 240 PTAPFVPSYL PPSMENVQQN LGFSAALHLM SSPMRPFAFK PAHQDGAGRS EMKEDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	6e-42	TCP family protein