PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38245.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 250aa MW: 28781.6 Da PI: 9.1043

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38245.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.4	1.8e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA+E+S+LCda+v +i+fs++gkl+ey++ TEY38245.1 9 KRIENKINRQVTFSKRRSGLLKKANEISILCDADVGLIVFSTKGKLFEYAT 59 79***********************************************86 PP
2	K-box	107.4	1.7e-35	77	174	3	100
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++ k+ e +s++ e+akLk+++e Lqr+qRh++GedL++Ls+keLq+Le+qL++slk+iR +Kn+l+ e+i+elqkk k+lqe+n+ L kk++e TEY38245.1 77 ERQLKEPEPDSPASWSLEHAKLKARMEVLQRNQRHYMGEDLDTLSMKELQNLEHQLDDSLKHIRRRKNQLMNESISELQKKDKALQEQNNILAKKIKE 174 56666666666889*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KANEISILCD ADVGLIVFST KGKLFEYATD 60 SCMERILERY ERHSYAERQL KEPEPDSPAS WSLEHAKLKA RMEVLQRNQR HYMGEDLDTL 120 SMKELQNLEH QLDDSLKHIR RRKNQLMNES ISELQKKDKA LQEQNNILAK KIKEREKETA 180 AAATMEQQQN HNLDSSGFGH PHHMGMGSFN HSNEMYQVEG EGAAAAGGMS VTQCQNQFSN 240 PVMPPWMLRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	140	173	RRRKNQLMNESISELQKKDKALQEQNNILAKKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69120.1	2e-91	MIKC_MADS family protein