PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38267.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 155aa MW: 17148.3 Da PI: 8.2026

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.1	2.6e-42	12	110	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++Cv+apyfp e+p kf nvhk+FGasnv+kll+++ +++reda++sl+yeAear++dPvyG++g i+ lq+q+ +l++el+++++ TEY38267.1 12 PCAACKFLRRKCLSGCVFAPYFPPEDPTKFVNVHKIFGASNVSKLLNEILPHQREDAVNSLAYEAEARLKDPVYGCIGAISVLQRQVLHLQKELEATNA 110 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MASSSSSYSN PPCAACKFLR RKCLSGCVFA PYFPPEDPTK FVNVHKIFGA SNVSKLLNEI 60 LPHQREDAVN SLAYEAEARL KDPVYGCIGA ISVLQRQVLH LQKELEATNA DLMRYTSNEI 120 VVYHQRRMAY GSGAGSYNPH PGYYSYGENP GHGTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	8e-68	LBD family protein