PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38359.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GATA
Protein Properties Length: 311aa    MW: 33494.4 Da    PI: 6.6957
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38359.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.41.8e-17233266134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  TEY38359.1 233 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 266
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEPELIDEID CGNFFDQMDD LIDFPPDSEC GDANLVSSSD CKDFPTWGEA LQGCDSLFPG  60
SHDSSASDLA AELSVPYEDI VQLEWLSTFV EDSFSGGGLT VGKENLRASN DSPHSQFQSL  120
SPVSVVESSS CSSSSSSGGK VMPLSPCHRG PQRARSKRPR PATFNPRPAI QLISPASSYQ  180
EIPHVSSALH GGVSSESNNF AESWPVKKSK KIKRTPPANP TAANQNPPPV RKCLHCEITK  240
TPQWRAGPMG PKTLCNACGV RYKSGRLFPE YRPAASPTFV PSLHSNSHKK VTEMRCKAET  300
RSAAAAPNTS V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157161KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.29e-40GATA family protein