PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38383.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 244aa MW: 26878.1 Da PI: 8.4945

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38383.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	161	183	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY38383.1 161 HECSYCGAEFASGQALGGHMRKH 183 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
METETATEEA AAVTPCLNTD VIAKGKRTKR QRPNSPFSFT ITPPPRAASS EESTTTEEAD 60 TARCLILLSQ GHFIPITKTR RDATTSGACM YTCKTCNRSF QSFQALGGHR ASHKKPKNEK 120 RYPIFSDEED FTSANKFSPT SLSLQLSSVS TTFAMKSPRV HECSYCGAEF ASGQALGGHM 180 RKHRGGAAAP IPTNIREAIV VDEEEAEERK KGGNWLSLDL NLPARDDERE RSPNRMAQPL 240 PLNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	6e-30	C2H2 family protein