PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38654.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 183aa MW: 20463.5 Da PI: 10.4206

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	3	23	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ C ksFs+ L H+r+H TEY38654.1 3 CKLCFKSFSNGKALGAHMRSH 23 ********************9 PP
2	zf-C2H2	16.1	3.2e-05	98	120	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C k+F+++ L +H +H TEY38654.1 98 HRCEECQKVFKSSQGLGSHKASH 120 79*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MDCKLCFKSF SNGKALGAHM RSHYAILPLP PKHHPDDTES SSGGGGKSKS KSKNSSRFKR 60 QRRINLEMEE ERDVALCLIM LSRDVWRRNS DCSSRKIHRC EECQKVFKSS QGLGSHKASH 120 SKRMRNSFQG REKGEVVGEC SMCPRIFKSA ALGGHKRSHL PAPKFVGNLV DLNLPAVNEE 180 ILG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	4e-20	C2H2 family protein