PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38809.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 214aa    MW: 23104.2 Da    PI: 7.2078
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38809.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.32.9e-39141141100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkC+++Cv+apyf +eq +++fa+vhk+FGasnv+kll ++pe++r d++ +++yeA+ r+rdP+yG+v++i++lqqq+ +l++el++l+
  TEY38809.1  14 PCGACKFLRRKCVAGCVFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHVPESRRLDTVITVCYEAQSRLRDPIYGCVAHIFNLQQQVVNLQQELSYLH 112
                 7***********************9989********************************************************************999 PP

      DUF260  99 ee 100
                 ++
  TEY38809.1 113 AH 114
                 86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MSNGNAAGSS GGGPCGACKF LRRKCVAGCV FAPYFDSEQG AAHFAAVHKV FGASNVSKLL  60
LHVPESRRLD TVITVCYEAQ SRLRDPIYGC VAHIFNLQQQ VVNLQQELSY LHAHIAAMEL  120
PAPPPLQHQQ QLLGPVSQEI LDFPAYDLSP QSPWSLYPRQ QIEQRHFSNT ATPAAVGVGG  180
GCDLQEMGRE LLNRHAPPMV GCSNQASSLP PNSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00220.11e-52LBD family protein