PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38816.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 247aa    MW: 28218.2 Da    PI: 9.7287
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF45.97.2e-151150342
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                i +++ r+ tf +R+  ++KKA+ELSvLC++ev +i+  +
  TEY38816.1 11 IVSERVRKSTFKRRLDSLIKKAHELSVLCGVEVVIIVHDP 50
                6788999*****************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MPRQKTKHTQ IVSERVRKST FKRRLDSLIK KAHELSVLCG VEVVIIVHDP KESHSTLWPS  60
HDHVMNGVMK FMARSKEPGP KKMVLHDKFL SDKLKSMTDR LLKLQKKNDE TEMRFLMTRI  120
FEGGIFNELD VRQLNGLDWF VEEKLKKLEN RYNELAGAQG QLLCTNGNNL HHSQMTPATV  180
ENRSGDFATT SIVASEDGWF GPGIQNTFGM SRGINLGSTE VARSFADWNQ GGVTDEFGRV  240
WPTNFYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.14e-21M-type_MADS family protein