PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY38819.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 241aa    MW: 27691.8 Da    PI: 9.8352
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY38819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.93.5e-151150342
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                i +++ r+ tf +R+  ++KKA+ELSvLC++e+ +i+  +
  TEY38819.1 11 ILSERVRKSTFKRRLDSLFKKAHELSVLCGVEIVIIVNDP 50
                6678899*****************************9655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MPRQKTKHTQ ILSERVRKST FKRRLDSLFK KAHELSVLCG VEIVIIVNDP KESYSTLWPS  60
REQVMNGVMK FMARSKEPGP KKMVLHDKFL SDKLKSMTDR LLKLQKKNDE TEMGFLMTRL  120
FEGGVFNELD VRQLNGLDQF VEEKLKKLEN RYNELAGAQG QLLCTNNPHH IQMMTENRSG  180
DFATTSITEK ERWFGPGIEN TFGMSRGINL GSTEVARSFA DWNQSGVPDE LGRAWAANFY  240
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.13e-20M-type_MADS family protein