PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY38835.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 175aa MW: 20141.2 Da PI: 10.2963

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY38835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0012	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k F++ L H +H TEY38835.1 84 YRCEECKKLFRSYQALGGHRASH 106 9***********99999998887 PP
2	zf-C2H2	11.5	0.00092	117	139	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C + F++ L H r+H TEY38835.1 117 HQCPFCRRIFPSGQALGGHKRSH 139 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MEKKHRCKLC FRKFANGRAL GGHMRSHMMK FYAEDSLPSS PVRSISDTTP EEHVARCLMM 60 MSRDTWHRRY EEEGEQKVIV KNKYRCEECK KLFRSYQALG GHRASHKKIK VGGVKNHQCP 120 FCRRIFPSGQ ALGGHKRSHF LQNSSRISQV LSIDLNLPAP VDDDEGTQIA ISILR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-36	C2H2 family protein