PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY39487.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 174aa    MW: 19684.2 Da    PI: 4.5856
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY39487.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.84.2e-397106199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrr+C+++C++apyf  eq +++fa+vhk+FGasnv+kll++lpe+ r+da+ ++ yeA ar++dP+yG++++i++lqqq++ l++e+++ +
  TEY39487.1   7 SCGACKFLRRRCTEECIFAPYFSYEQaANHFAAVHKVFGASNVSKLLSHLPEHSRSDAAITVSYEALARMEDPIYGCIAHIFALQQQVAILEEEIEMYG 105
                 6***********************9978******************************************************************99876 PP

      DUF260  99 e 99 
                 +
  TEY39487.1 106 K 106
                 5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MTGVSSSCGA CKFLRRRCTE ECIFAPYFSY EQAANHFAAV HKVFGASNVS KLLSHLPEHS  60
RSDAAITVSY EALARMEDPI YGCIAHIFAL QQQVAILEEE IEMYGKAIAN PGGYFSREWE  120
NEAIMQTMMD PGTSDVISEG CLLERLLEQD YYIYQDNNLQ SLWTKYAAQP QSQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.11e-57LBD family protein