PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY39513.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 441aa MW: 48462.9 Da PI: 7.4794

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY39513.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4e-16	29	74	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W+++Ed +l +v ++G ++W++Iar ++ gR++k+c++rw + TEY39513.1 29 RGTWSPQEDAILSGLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 74 89****************************.*********985 PP
2	Myb_DNA-binding	48.5	2e-15	139	177	7	47
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 eEd +++da++ +G++ W++Ia+ ++ gRt++++k++w++ TEY39513.1 139 EEDRIILDAHAVYGNK-WASIAKLLP-GRTDNSIKNHWNST 177 9*************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MMNGEQQEEV FMEEDGGGAE LAAANGKVRG TWSPQEDAIL SGLVSKFGAR NWSLIARGIP 60 GRSGKSCRLR WCNQLDPAVK RKPFTGGLLY ESVWKGCVLF RKAIKKHFAL CFAYARNRAT 120 LHPILSEVLN VKLCLFAYEE DRIILDAHAV YGNKWASIAK LLPGRTDNSI KNHWNSTLRR 180 RCLKSTRSPP APGQMLQDTG TNWMQASIEG SSTGSPLTSF KSETLVMFYQ PNSPTPEPNE 240 AIVSDGSLKS SRTSELEDMR LMEDQSNEGG GNALTSLHRS AQGEQPAISR PVAKLGAFNP 300 IYNDTLLAGI RTAPDSGLCG FVDGEHVIPS QCGHGCCSAP TEHPSHRSLL GPEFVEYEQL 360 PAISSQEMMS MVTDLNSIAW IRSGLENTGR LSADARSSVL MNMDERMRND HFLFTSVTSE 420 ARRSQMAMPA FNLRAQLEGM S

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MMNGEQQEEV FMEEDGGGAE LAAANGKVRG TWSPQEDAIL SGLVSKFGAR NWSLIARGIP  60
GRSGKSCRLR WCNQLDPAVK RKPFTGGLLY ESVWKGCVLF RKAIKKHFAL CFAYARNRAT  120
LHPILSEVLN VKLCLFAYEE DRIILDAHAV YGNKWASIAK LLPGRTDNSI KNHWNSTLRR  180
RCLKSTRSPP APGQMLQDTG TNWMQASIEG SSTGSPLTSF KSETLVMFYQ PNSPTPEPNE  240
AIVSDGSLKS SRTSELEDMR LMEDQSNEGG GNALTSLHRS AQGEQPAISR PVAKLGAFNP  300
IYNDTLLAGI RTAPDSGLCG FVDGEHVIPS QCGHGCCSAP TEHPSHRSLL GPEFVEYEQL  360
PAISSQEMMS MVTDLNSIAW IRSGLENTGR LSADARSSVL MNMDERMRND HFLFTSVTSE  420
ARRSQMAMPA FNLRAQLEGM S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	7e-71	MYB family protein