PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY39940.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

E2F/DP

Protein Properties

Length: 362aa MW: 39331.6 Da PI: 8.2122

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY39940.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.3	2.3e-27	108	190	2	71
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k++i+wkg TEY39940.1 108 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdpnnslaspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKDIQWKG 190 689******...*999***************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MGNHSNSNSS TQEDGNKNSS TVSKGSGGLG GATRSWGTIV SGGQSKSTSG SVGSPSSRSE 60 AAMATTVSDS AIMRMNNLDI QGDDAGSQGT AGNRKKKRGQ RAVGGDKSGR GLRQFSMKVC 120 EKVESKGRTT YNEVADELVA EFSDPNNSLA SPDQQQYDEK NIRRRVYDAL NVLMAMDIIS 180 KDKKDIQWKG LPRTSLDDIE ELKTERLGVR SRIEKKAAYL EELEEQYVGL QNLIQRNKQL 240 YGSGNTPTGG VALPFILVQT RPHATVEVEI SEDMQLVHFD FNSTPFELHD DNYVLKAMKF 300 AEKSRNDGTA QNIPSDGGES CSMLTSYRTQ GPHPSGSSIS SRPPNSSPLP GILKARVKHE 360 QH

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MGNHSNSNSS TQEDGNKNSS TVSKGSGGLG GATRSWGTIV SGGQSKSTSG SVGSPSSRSE  60
AAMATTVSDS AIMRMNNLDI QGDDAGSQGT AGNRKKKRGQ RAVGGDKSGR GLRQFSMKVC  120
EKVESKGRTT YNEVADELVA EFSDPNNSLA SPDQQQYDEK NIRRRVYDAL NVLMAMDIIS  180
KDKKDIQWKG LPRTSLDDIE ELKTERLGVR SRIEKKAAYL EELEEQYVGL QNLIQRNKQL  240
YGSGNTPTGG VALPFILVQT RPHATVEVEI SEDMQLVHFD FNSTPFELHD DNYVLKAMKF  300
AEKSRNDGTA QNIPSDGGES CSMLTSYRTQ GPHPSGSSIS SRPPNSSPLP GILKARVKHE  360
QH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-140	E2F/DP family protein