PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY40219.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 247aa MW: 26996.8 Da PI: 6.9223

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY40219.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	109.8	3.9e-34	20	100	2	66
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................s 66 +gkkdrhsk++T++g+RdRRvRl a++a++f+d+qd+LG+d++sk+++WLl+ ak ai++l ++ TEY40219.1 20 TGKKDRHSKVSTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLLRHAKSAIDDLDQLppwhptpsadadnsnsA 100 79**************************************************************66553333322222210 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MRNAGGEIVA VDGGYIVRST GKKDRHSKVS TAKGPRDRRV RLAAHTAIQF YDVQDRLGYD 60 RPSKAVDWLL RHAKSAIDDL DQLPPWHPTP SADADNSNSA FPPPSLDPSA AADAANSCFP 120 AAEGGSAAMR LFHTFADSDL LRSQDLRLSL QSFQEPILLH HQPPQQQQNP IQIGIEGWAE 180 HHQFQQMLGQ NQFVSQRGTL QSNNTPSIRA WMDPSAADPF ASGFSGFAIH ARNEEERGGS 240 ASSGSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	2e-44	TCP family protein