PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41084.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GATA

Protein Properties

Length: 1235aa MW: 138720 Da PI: 9.2145

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	52.8	5.2e-17	746	777	1	32
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 Cs+C++tkTplWR+gp g+ktLCnaCG++yr+ TEY41084.1 746 CSHCQSTKTPLWREGPLGPKTLCNACGVRYRS 777 *******************************7 PP
2	GATA	56.5	3.7e-18	1152	1186	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++C +tkTp+WR gp g+ktLCnaCGl+yr +l TEY41084.1 1152 CAHCESTKTPQWRDGPLGPKTLCNACGLRYRTGRL 1186 *******************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 1235 aa Download sequence
MCHFVLSVPV TVEASEANDG YKQCEHTVKK WASFSADTEV NGNQHALRDL LLFLHVPRTG 60 GRTYYHCFLK KLYSSSLECP RSYDKLRYNS RKSSCRLLTT HDDYSVMSKL PRERTSLMTI 120 LRDPIERVFS TYEFSLEVAS RFLIHPNLTS VLTMSRSARR KTSGVSTLDI WPWKYLVPWM 180 REDLFSRRDI RKLRGQVNLV AGDPYDMEDI AMPLHEYINE PVTRDIVHNG ATFQIVGLTN 240 NSYFAGAHEV RHCVLKYHSL GDYVLQVAKK KLDKMIYVGL TENHKESANV FANVVATQVI 300 SKHKTSSSNS DGAGDNDSEQ HSQLPDMKTD ANDKDQNQKN MSSTGEDNAI QENLIVSALF 360 YQWTVGKLMK AYNSCVSKLR DSQADRRVNS LKQLYPANFT KEARKRVPEA LIKEITLLNS 420 LDIELYKYGQ YIFRKQQEHM TQSMVHDCRF SDFDVANSAE SNCIPEELSG MLSTSTYRGI 480 YDNPSWKFVS LSAAAALLLI FIFIFPRTRS FGFVSDSLSL FHVYSRSMAE VGDSLGPDED 540 YDVLLNILDF PIECLEGDEV AAEWDSSKAQ FLGPIPSSLL MEPPLMSNEE FNVPNSSPQP 600 HSHIDAAPEL KQLANHVDTC SLLIPRLRKF TKVQESRSFC TQSPISVLES NGSCSREKCL 660 FIKPEHAIPA QSRSKRVRYS GVNPWLSAAH ELSTSKRTSS WKRLIQQPVP IDLMRKSDKN 720 VDNLIIVQNL PHEVASKPCD ALVKKCSHCQ STKTPLWREG PLGPKTLCNA CGVRYRSGCL 780 FPEYRPAASP TFVPSQHSNS YMKVAEMRSA AKLMEVKNKV APLSPQQTEA KIDEPPKSPQ 840 LEAKFLELPN SHMKVEEMRT AAKLMEVKTK GAPLSPQTEA NFDEPPKARQ LEGKIWELPN 900 SHMKVAEMRS AAKLMEVKIK IVGTSEQKQP TKQIKQMQLA EHVDTSSSLQ IAVVPEKKLL 960 AKDDDDTSSS FQIALVPKRK LLPKDDDTSS SLQIAGAPKQ KLLAKHDDTY SPHIPLQNKS 1020 TKVQESGAFC TKSRVSLLQD SSYLRYRLKY VEPGGVDPTN FMSGKNSRKV PVAVGVSKNL 1080 PQTRHTSLHG SDPAPLQKAS NSMRGKKSRK RLLQLPVSVD VMKNSPQNVA SSLDITDPAS 1140 LNPSCPAVVE KCAHCESTKT PQWRDGPLGP KTLCNACGLR YRTGRLLPEY RPAASPTFVP 1200 SLNSNSHRKV VRMRIKAMQS KMEISRSVHE DEGRV

Sequence ? help Back to Top

Protein Sequence Length: 1235 aa Download sequence

MCHFVLSVPV TVEASEANDG YKQCEHTVKK WASFSADTEV NGNQHALRDL LLFLHVPRTG  60
GRTYYHCFLK KLYSSSLECP RSYDKLRYNS RKSSCRLLTT HDDYSVMSKL PRERTSLMTI  120
LRDPIERVFS TYEFSLEVAS RFLIHPNLTS VLTMSRSARR KTSGVSTLDI WPWKYLVPWM  180
REDLFSRRDI RKLRGQVNLV AGDPYDMEDI AMPLHEYINE PVTRDIVHNG ATFQIVGLTN  240
NSYFAGAHEV RHCVLKYHSL GDYVLQVAKK KLDKMIYVGL TENHKESANV FANVVATQVI  300
SKHKTSSSNS DGAGDNDSEQ HSQLPDMKTD ANDKDQNQKN MSSTGEDNAI QENLIVSALF  360
YQWTVGKLMK AYNSCVSKLR DSQADRRVNS LKQLYPANFT KEARKRVPEA LIKEITLLNS  420
LDIELYKYGQ YIFRKQQEHM TQSMVHDCRF SDFDVANSAE SNCIPEELSG MLSTSTYRGI  480
YDNPSWKFVS LSAAAALLLI FIFIFPRTRS FGFVSDSLSL FHVYSRSMAE VGDSLGPDED  540
YDVLLNILDF PIECLEGDEV AAEWDSSKAQ FLGPIPSSLL MEPPLMSNEE FNVPNSSPQP  600
HSHIDAAPEL KQLANHVDTC SLLIPRLRKF TKVQESRSFC TQSPISVLES NGSCSREKCL  660
FIKPEHAIPA QSRSKRVRYS GVNPWLSAAH ELSTSKRTSS WKRLIQQPVP IDLMRKSDKN  720
VDNLIIVQNL PHEVASKPCD ALVKKCSHCQ STKTPLWREG PLGPKTLCNA CGVRYRSGCL  780
FPEYRPAASP TFVPSQHSNS YMKVAEMRSA AKLMEVKNKV APLSPQQTEA KIDEPPKSPQ  840
LEAKFLELPN SHMKVEEMRT AAKLMEVKTK GAPLSPQTEA NFDEPPKARQ LEGKIWELPN  900
SHMKVAEMRS AAKLMEVKIK IVGTSEQKQP TKQIKQMQLA EHVDTSSSLQ IAVVPEKKLL  960
AKDDDDTSSS FQIALVPKRK LLPKDDDTSS SLQIAGAPKQ KLLAKHDDTY SPHIPLQNKS  1020
TKVQESGAFC TKSRVSLLQD SSYLRYRLKY VEPGGVDPTN FMSGKNSRKV PVAVGVSKNL  1080
PQTRHTSLHG SDPAPLQKAS NSMRGKKSRK RLLQLPVSVD VMKNSPQNVA SSLDITDPAS  1140
LNPSCPAVVE KCAHCESTKT PQWRDGPLGP KTLCNACGLR YRTGRLLPEY RPAASPTFVP  1200
SLNSNSHRKV VRMRIKAMQS KMEISRSVHE DEGRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08010.2	2e-33	GATA family protein