PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41136.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 366aa MW: 40892.5 Da PI: 5.0881

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.8	2e-07	13	55	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r C+ +++ ++ l+C+ ++ lC +C e H+ H++ TEY41136.1 13 DRLCDFCNDSKALLYCRADSAKLCFSCDREVHSTnplfekHNR 55 679****99*******************66777777776 PP
2	zf-B_box	23.4	1.2e-07	56	99	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Htvvpl 42 C+ +++ + ++fC + lC++C e+H++ H+++pl TEY41136.1 56 SLLCDSCNSSPSSIFCCAESAVLCQNCDWESHNSfgsiHDRRPL 99 568*****************************889999999876 PP
3	CCT	60	8e-21	322	365	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ al+RYkeK+ktR+++K++rYesRK++AesR R+KGrF+k + TEY41136.1 322 RDSALSRYKEKKKTRRYDKHVRYESRKVRAESRMRIKGRFAKMN 365 899**************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MTKAEQDTHS QTDRLCDFCN DSKALLYCRA DSAKLCFSCD REVHSTNPLF EKHNRSLLCD 60 SCNSSPSSIF CCAESAVLCQ NCDWESHNSF GSIHDRRPLE GFTGCPSVSE LLGFLGLQDL 120 GEKKLDLGGG NDDEFSDVLV WETPSVVSLN DLIVANDYDD SAPAFQATRV PSLPKNRNAL 180 CGKHKGEIFI QLHEMAKKDP NYSGSLDFEA YAESTQPEIT AKCLKASPGL ETKVEQLNVL 240 SDERSNVDWC FVGGVQDEGF PSTYFGDFAE MSHLVPDKDS DACDSTGFTN GLQENQPCVP 300 GDSKAFQLFP TSATRELNSQ ERDSALSRYK EKKKTRRYDK HVRYESRKVR AESRMRIKGR 360 FAKMNQ

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MTKAEQDTHS QTDRLCDFCN DSKALLYCRA DSAKLCFSCD REVHSTNPLF EKHNRSLLCD  60
SCNSSPSSIF CCAESAVLCQ NCDWESHNSF GSIHDRRPLE GFTGCPSVSE LLGFLGLQDL  120
GEKKLDLGGG NDDEFSDVLV WETPSVVSLN DLIVANDYDD SAPAFQATRV PSLPKNRNAL  180
CGKHKGEIFI QLHEMAKKDP NYSGSLDFEA YAESTQPEIT AKCLKASPGL ETKVEQLNVL  240
SDERSNVDWC FVGGVQDEGF PSTYFGDFAE MSHLVPDKDS DACDSTGFTN GLQENQPCVP  300
GDSKAFQLFP TSATRELNSQ ERDSALSRYK EKKKTRRYDK HVRYESRKVR AESRMRIKGR  360
FAKMNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47890.1	8e-94	CO-like family protein