PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41273.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

E2F/DP

Protein Properties

Length: 569aa MW: 62238.4 Da PI: 4.781

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.6	7.6e-27	224	289	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek+ kn+i+wkg TEY41273.1 224 RYDSSLGLLTKKFINLIKHAEDGVLDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKNLKNRIQWKG 289 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MQRKTPPSTS RKQSPFTSMK PPFGGGGDYH HFASGDPDQE FSEAVVVNKR PVSVPSFLLN 60 LELRVVLIYC MVHVHPCYTL GLSGLLDNLI CALDALHDYS SSLAHMFRIG YLSVCSTNVA 120 DNGWSIGLWD NFSVLLLILV CLFVVCKPLK RKTGVAEPEA EPADNNAGPG NLNAPKGPFQ 180 TPPPAKSGKQ KVSRTKANRA GSQTPMPNVG SSSGNNLTPV GHCRYDSSLG LLTKKFINLI 240 KHAEDGVLDL NKAADTLEVQ KRRIYDITNV LEGIGLIEKN LKNRIQWKGL DVARPGEADE 300 SAPALQEELE NLNIEESRLD DRIREMQEKL RGMIEDKGNE RWLFVTEDDI KCLPCFKNET 360 LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI VLRSTMGPID VYLVSQHEEK FEEVDAVDEH 420 PSIPAVPGVE ANDYASVPSP RPKTGGSETA MPGEELRRMC PDVSTSDDFV SGILKIVPEV 480 DSGADYWLSS DADISYTDMW SVEPIIDDWE SLDVPDYATA GITTPRAQTP ARNMTAASPV 540 QATTPSALAT DQIPPATTKP PPSTIPSGI

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MQRKTPPSTS RKQSPFTSMK PPFGGGGDYH HFASGDPDQE FSEAVVVNKR PVSVPSFLLN  60
LELRVVLIYC MVHVHPCYTL GLSGLLDNLI CALDALHDYS SSLAHMFRIG YLSVCSTNVA  120
DNGWSIGLWD NFSVLLLILV CLFVVCKPLK RKTGVAEPEA EPADNNAGPG NLNAPKGPFQ  180
TPPPAKSGKQ KVSRTKANRA GSQTPMPNVG SSSGNNLTPV GHCRYDSSLG LLTKKFINLI  240
KHAEDGVLDL NKAADTLEVQ KRRIYDITNV LEGIGLIEKN LKNRIQWKGL DVARPGEADE  300
SAPALQEELE NLNIEESRLD DRIREMQEKL RGMIEDKGNE RWLFVTEDDI KCLPCFKNET  360
LIAIKAPHGT TLEVPDPDEA VDYPQRRYRI VLRSTMGPID VYLVSQHEEK FEEVDAVDEH  420
PSIPAVPGVE ANDYASVPSP RPKTGGSETA MPGEELRRMC PDVSTSDDFV SGILKIVPEV  480
DSGADYWLSS DADISYTDMW SVEPIIDDWE SLDVPDYATA GITTPRAQTP ARNMTAASPV  540
QATTPSALAT DQIPPATTKP PPSTIPSGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-124	E2F/DP family protein