PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY41353.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 818aa    MW: 90692.1 Da    PI: 6.4794
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY41353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.81e-23192293199
                 EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 f+k+lt sd++++g +++p++ ae++      +++ + s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv++++L +gD v+F   + + +el+
  TEY41353.1 192 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyKEQ-RPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--RGEAGELR 287
                 99****************************86333.45679************************************************..449999** PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 ++++r+
  TEY41353.1 288 LGIRRA 293
                 ***996 PP
2Auxin_resp110.61.5e-36318399182
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                 +a+a+s+++ F+v+Y+Pras+++F+++++k++k ++++v vG+Rf+m+f+ +d +err+sG+v+gv d+dp+rW+nSkWr+L
  TEY41353.1 318 VANAISSNNSFHVFYSPRASHADFIIPAKKYVKCTSSRVPVGTRFRMRFDFDDTPERRFSGVVTGVGDMDPYRWQNSKWRCL 399
                 689******************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 818 aa     Download sequence    
MEFDLNHAVS EVEKNNACVN GECEDGSGDY EFLQTSILSP NAASHSSSFS PCSESAPPSI  60
YMELWHACAG PLTSLPKKGN VVVYFPQGHM EQAASASPFP HMDVPTFDLP PQIFCRVVDV  120
QLLVSALLSS CFVPNALAGF ANKENDEVYT QLNLLPLPEV EGVKLNGEES ENAGTGEDGY  180
GVMPAKSTSH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYKEQRPSQ ELIAKDLHGV  240
EWKFRHIYRG QPRRHLLTTG WSIFVSQKNL VSGDAVLFLR GEAGELRLGI RRAARPRNGL  300
PDSIIKNQSS YPNVLSPVAN AISSNNSFHV FYSPRASHAD FIIPAKKYVK CTSSRVPVGT  360
RFRMRFDFDD TPERRFSGVV TGVGDMDPYR WQNSKWRCLM VRWDEDIMSN HQERVSPWDI  420
DLSGSYAPLS IQSSPRMKKL RSNLHVAPHG SPIAGGDAVL DFEESVRSSK VLQGQENVGL  480
VSPFYRGDRV NRQLDFGVQP TTLNPVPNGM DKMNYGEFMR NHAPANFTGF LESTWFPKVL  540
QGQEICSFKS LTGRSSSDLG VWSKPQHGYN IHNQRPMPSF YPLASEGSRS MSIPHKSIHT  600
GGPLLSNFSN FQTGNHVLSP TSILSGTKAD VDRMPHLTNE PRALERTSVL KNVNTESNLK  660
ESVPSCKIFG FSLTEDPAAI NLQGPSKRSC TKVHKQGSLV GRAIDLSRLN GYDDLLTELE  720
RLFNMEGLLH DPNHGWRILY TDSENDMMVV GDDPWHEFVE VAMKIHIYTQ EEVEKLTIGM  780
NSDDTKSCLE EAPSAPDVSK SSSVGEPDSS PTVIRMKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein