PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41490.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 208aa MW: 21559.5 Da PI: 8.4908

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41490.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.8	0.00017	62	84	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ Cgk Fs++ L H +H TEY41490.1 62 YNCSVCGKGFSSHQALGGHKASH 84 89**************9998887 PP
2	zf-C2H2	17	1.7e-05	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cg+sF++ L H+r+H TEY41490.1 120 HNCSTCGRSFPSGQALGGHMRKH 142 67********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MPPEAQNPAA PPHRRFDYDS SRKAKRSKRV SDDEYIAGCL VALRSGGETS SSAAAAKSPR 60 IYNCSVCGKG FSSHQALGGH KASHRNKPAT VGAAENKPSN STSTATTADD DSIAGPHRLH 120 NCSTCGRSFP SGQALGGHMR KHYGGVIGGS KSGVNSSDGG NGEGFSVVTS FSGGGLTSSS 180 YGDGDGDVTR NWELNWISEE GLDLTLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43170.1	1e-19	C2H2 family protein