PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY41530.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family MIKC_MADS
Protein Properties Length: 244aa    MW: 27940.7 Da    PI: 10.1822
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY41530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF849.2e-273989151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+i+n + rqvtfskRr+g++KKA ELS+LCdae+a+i+fs +gkl++yss
  TEY41530.1 39 KKIDNLTARQVTFSKRRKGLFKKARELSTLCDAEIALIVFSASGKLFDYSS 89
                68***********************************************96 PP
2K-box41.27e-151221862286
       K-box  22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 
                  kL + + +L  e+++l Ge L+ Lsl  L++Le+ +e ++++iR++Kne l ++++el+ k  +
  TEY41530.1 122 GKLSSHLMELSIELKQLEGEHLQGLSLASLMKLEKLIEGGMSRIRKTKNERLEDEMRELKTKASA 186
                 58999999*****************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MRSNFTLFLQ ISCTTLPPLN VKFSFFKLFK MVRQKIEIKK IDNLTARQVT FSKRRKGLFK  60
KARELSTLCD AEIALIVFSA SGKLFDYSSS SMMQIIQRHD HQTECKLLRQ PPLYIQGSDG  120
HGKLSSHLME LSIELKQLEG EHLQGLSLAS LMKLEKLIEG GMSRIRKTKN ERLEDEMREL  180
KTKASASTYP NFLPNKYEFK LMEENSLLNT QPIEKSIKRN AFDLGIQLIS DSNCSGTFLK  240
LGLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-49MIKC_MADS family protein