PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY41634.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 226aa MW: 25173.1 Da PI: 8.4006

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY41634.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++Fs+ L H +H TEY41634.1 81 YECKTCSRTFSSFQALGGHRTSH 103 99**********99998888777 PP
2	zf-C2H2	12.5	0.00046	149	171	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY41634.1 149 HECSICGSEFASGQALGGHMRRH 171 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MNIDLSEEFS ASNDHTVFKR KRTKRHLPSA IADVDSNSSP SSTEISTNTE EDEDLANCLI 60 LLARGRLRPQ STRRKFAEDA YECKTCSRTF SSFQALGGHR TSHKKPNSAV EFDRKIRSPP 120 PPEEAKFGKF NAIVNTPPPP IKLQLNKVHE CSICGSEFAS GQALGGHMRR HRSPPSARSG 180 DDSNSGDHDH RHRNVMIQSL DLNLPAPPEE FSKPRLVFAA VVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28200.1	4e-40	C2H2 family protein