PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY42216.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 228aa MW: 25320.2 Da PI: 6.5127

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY42216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.3	8.5e-16	24	84	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ TEY42216.1 24 RSRWTPKPEQILILETIFNSgMVNPPKDETVRIRKLLekfgSVADANVFYWFQNRRSRSRR 84 89***************99***********************************997 PP
2	Wus_type_Homeobox	106.9	1.3e-34	23	86	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G + d+NVfyWFQNr++R+r++q TEY42216.1 23 VRSRWTPKPEQILILETIFNSGMVNPPKDETVRIRKLLEKFGSVADANVFYWFQNRRSRSRRRQ 86 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MEDATASRQQ QQQQQGEAAE QPVRSRWTPK PEQILILETI FNSGMVNPPK DETVRIRKLL 60 EKFGSVADAN VFYWFQNRRS RSRRRQRQVQ ASLSAADHPS EIRYDHTFSP NPLSYPMPNS 120 GSSSSSSSSF GLEGHNSGCG IGLSGYPGLM QDFEQSPIFC HSQNQSQMMT VFVNGVATEV 180 GRGPVDVKAM FGGDFVVYHS SGLAVEMNEY GIVMQGLQHG ESYFLVNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	8e-34	WOX family protein