PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY42548.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 355aa    MW: 40540.4 Da    PI: 4.0379
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY42548.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.91.3e-0811411040
                HHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF 10 qvtfskRrngilKKAeELSvLCdaevaviif 40
                   +  R++g+ KK e LS+LCd+ +++ii 
  TEY42548.1 11 LAALKMRKEGLVKKIEQLSTLCDVPACMIIH 41
                556778***********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MELVKKEKAR LAALKMRKEG LVKKIEQLST LCDVPACMII HDPSTNSSFI WPDDFSQVRR  60
LIHSFKANPT AVKPYGLSDF FKGRQKELAK TKYDDRLDLM DESQLLELDK AVRSRIDLLK  120
RKAMVKKEND VVLDLEEFEH IDQDDIFSAA DAAMVKKEND VVLDLEEFEH IDQDDIFSAA  180
DDVMAANDVF IDLDEIEEID QDDIFSAADD VMVKKENNVF IDLDKIEGLD QDDIFSAAAD  240
DVMAAMVKEE NDVFIDLDEV EHIDQDAIFS AMSANTQLPV QDYYCPLPQN QPTPFMDHNY  300
LNYVNWYADQ NLNCSSMDVK QNVNWCADQD LNCSSMDVNW FTGDGGGVLA SYLWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.18e-11M-type_MADS family protein