PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY42550.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 522aa    MW: 57412.7 Da    PI: 5.2144
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY42550.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3881.1e-1181415221374
        GRAS   1 lvelLlecAeavssgdle..........laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                 l++lL++cAe++s+ d            +a++lL  ++e++s +g+p+qRl ay++eAL+arl++s+s ++k+l++ e s     + ++ ++l+ ++ P
  TEY42550.1 141 LKQLLIACAEVISEADIIsfserkiaasAAETLLDMIQERVSVSGEPLQRLGAYMLEALRARLLSSGSLICKKLKCDEPS---GPDLMSHMQLLAQILP 236
                 5799********9976432333445455999************************************************9...9999999********* PP

        GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                 +++f++  a   I ea+e+e+r+H+iDf+i qG QW++++qa a+Rp+gpp++RiTgv+++es   +   le +g+rLa++Ae++gvpfef+  +a++ 
  TEY42550.1 237 FYRFAYTSASVVIGEAMENEKRIHVIDFQIAQGSQWLSFIQAVAQRPGGPPHVRITGVDDSESAhaRGGGLELVGQRLAQLAESCGVPFEFHG-AATSG 334
                 ************************************************************9888889999***********************.999** PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerik 284
                  d++le+L++++gEa+aVn+ + lh+++desvs++++rd++L+lvkslsPkv+++veqe+++n+++F +rfle+l+yy+a+f+++ +a l+r++ +ri+
  TEY42550.1 335 CDVQLENLNMQHGEAVAVNFPYVLHHIPDESVSTSNHRDRLLRLVKSLSPKVMTLVEQESNTNTATFPQRFLETLDYYAAMFECIdAAALARDDMQRIN 433
                 *************************************************************************************9899********** PP

        GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  E++++++++v+++aceg+er erhe ++kWr rl++aGF++++++ ++++ ++ +l++++   y v e ++++++gWk+++Lvs+S Wr
  TEY42550.1 434 AEEHCVAKDVVSIIACEGNERMERHEVFGKWRWRLSMAGFSQIRITPSVTTAVRDMLKEYN-PSYGVAEANDAVYIGWKNKALVSFSGWR 522
                 *************************************************************.66*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MQKASQEALA CSSVHNSHIL PSKSQDTELS FQACAEPFYT LESTPVTGSA VFSSPTATSV  60
SSNKSPFSPL LSHSYVSDIH HSSDNSSSLN DSFDSLWLLS NESMGPECGS IYNGSSTDES  120
AQPCYSTRYH RIIEMASNMD LKQLLIACAE VISEADIISF SERKIAASAA ETLLDMIQER  180
VSVSGEPLQR LGAYMLEALR ARLLSSGSLI CKKLKCDEPS GPDLMSHMQL LAQILPFYRF  240
AYTSASVVIG EAMENEKRIH VIDFQIAQGS QWLSFIQAVA QRPGGPPHVR ITGVDDSESA  300
HARGGGLELV GQRLAQLAES CGVPFEFHGA ATSGCDVQLE NLNMQHGEAV AVNFPYVLHH  360
IPDESVSTSN HRDRLLRLVK SLSPKVMTLV EQESNTNTAT FPQRFLETLD YYAAMFECID  420
AAALARDDMQ RINAEEHCVA KDVVSIIACE GNERMERHEV FGKWRWRLSM AGFSQIRITP  480
SVTTAVRDML KEYNPSYGVA EANDAVYIGW KNKALVSFSG WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.11e-163GRAS family protein