PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY42816.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C2H2
Protein Properties Length: 180aa    MW: 20089.8 Da    PI: 10.4697
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY42816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26e-055072123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ F++   L  H+++H
  TEY42816.1 50 YVCSFCKREFRSAQALGGHMNVH 72
                9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEKASNMKQM HHFKFKVPSF DFASDRNNSN PSSVDGDLVA AGFSWPPRSY VCSFCKREFR  60
SAQALGGHMN VHRRDRARLR QSPPRDGGGN GGQFSPLNLN LDPNPSFHPN PNLMKFPHFT  120
SKLPPTTPVT ADFMKVRAAR GFLGSSEIKK PGFVRLDLEI GLISPSSKEE LDLELRLGYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.11e-26C2H2 family protein