PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY42927.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 437aa MW: 47610.8 Da PI: 6.5815

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY42927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.8	3.9e-16	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W+++Ed +l +v ++G ++W++Iar ++ gR++k+c++rw + TEY42927.1 34 RGTWSPQEDAILSGLVSKFGARNWSLIARGIP-GRSGKSCRLRWCNQ 79 89****************************.*********985 PP
2	Myb_DNA-binding	49	1.4e-15	135	173	7	47
HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 eEd +++da++ +G++ W++Ia+ ++ gRt++++k++w++ TEY42927.1 135 EEDRIILDAHAVYGNK-WASIAKLLP-GRTDNSIKNHWNST 173 9*************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MMNGEQEKVV EEVFMEEDGG GAELAAAAVD GKVRGTWSPQ EDAILSGLVS KFGARNWSLI 60 ARGIPGRSGK SCRLRWCNQL DPAVKRKPFT ATLHLILSEV LNVKLCLFAW YSGVKAANLL 120 HVYEALNWPK LSSYEEDRII LDAHAVYGNK WASIAKLLPG RTDNSIKNHW NSTLRRRCLK 180 STRSPPAPGQ MLQDTGTNWM QASIEGSSAG SPLNSFKSET LVVSYQPNSP TPEPYEAIVS 240 DGSLKSSRTS ELEDMRLMED QSNECGGNAF TSLHHSSQGE QPAISRPVAK LGAFNPIYKD 300 TLLAGTRTAP NSGLCGFADG EHVIPSQCGH GCCSGATGHP SHRSLLGPEF VEYEQLPAIS 360 SQEMMSIVTD LNSIAWIRSG LENTGRLSAD AKSSVLMNMD ERMRNDHFLF TSVTGEARSS 420 QMAMPAFNLR AQLEGMS

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MMNGEQEKVV EEVFMEEDGG GAELAAAAVD GKVRGTWSPQ EDAILSGLVS KFGARNWSLI  60
ARGIPGRSGK SCRLRWCNQL DPAVKRKPFT ATLHLILSEV LNVKLCLFAW YSGVKAANLL  120
HVYEALNWPK LSSYEEDRII LDAHAVYGNK WASIAKLLPG RTDNSIKNHW NSTLRRRCLK  180
STRSPPAPGQ MLQDTGTNWM QASIEGSSAG SPLNSFKSET LVVSYQPNSP TPEPYEAIVS  240
DGSLKSSRTS ELEDMRLMED QSNECGGNAF TSLHHSSQGE QPAISRPVAK LGAFNPIYKD  300
TLLAGTRTAP NSGLCGFADG EHVIPSQCGH GCCSGATGHP SHRSLLGPEF VEYEQLPAIS  360
SQEMMSIVTD LNSIAWIRSG LENTGRLSAD AKSSVLMNMD ERMRNDHFLF TSVTGEARSS  420
QMAMPAFNLR AQLEGMS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55730.1	1e-70	MYB family protein