PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY42951.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

NF-X1

Protein Properties

Length: 817aa MW: 90129.6 Da PI: 8.4589

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY42951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.3	5.7e-07	241	259	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG H+C+++CH G C+pC+ TEY42951.1 241 CGAHRCGEICHDGSCQPCR 259 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 817 aa Download sequence
MLSSAAHPPQ HLSSDSDSDS SSPSHSHQRH PDLSSSIFQS YLSHSSSRTT TTAADDLHHQ 60 DLIKIQSFLT SSRAGGLSCL ICLERIKPTD PTWSCSSRCF AIFHLLCIQS WAHQSTTLAA 120 SRASARAAVA PDESSLAWPC PKCRVEYLKP QTPKNYYCFC GKVEDPPRDP WVLPHSCGEI 180 CGRSLKYDCG HFCLLLCHPG PCPACPKLVK NRCFCGKLED VRRCGLKEFS CKGVCGKGLE 240 CGAHRCGEIC HDGSCQPCRV KGSFRCQCGK EEMVRECCER EFRCNGECKK MLSCGRHVCE 300 KGCHEGGCGE CPFQGKRSCP CGKRVYEGMA CDVSLPLCGS TCNKLLSCGF HRCPERCHHG 360 PCVENCRMIV TKPCSVSLGI VVGMLVSAAA AMGTALLAQR YVTGSSGVEI TSAQLHVIGN 420 SVAIVLCNVW TRGSFVEPYR GACAPCPLMV RISCACGNTH FEVPCGTETE QKPPKCHKPC 480 PVAPLCRHAP QSKPHRCHYG ACPPCRLTCG ERYSCGHECQ LRCHGPVPPP RPEFTLKPKK 540 KKGNYLSEAT PGSPCPPCPE VVLRSCFGRH IGAERMDRDP KCPHPCPMRC HPGECPPCKT 600 LIKRSCHCGS MVHVFECKYY NCLSQKEQMV VRSCKGPCHR KLPNCTHLCP ETCHPGPCPS 660 PDKCSKKVTV RCGCQTLKKE WLCKDVQAAH ISSGCDPKEI PKNQFGVGLL PCGSDCKSKV 720 KALDSELHLR QVKPQEEKES DKASNVSKRR RRRQRVHEEE NASRLQRIVG VARRILLVLI 780 VVAAVVVSAY FGYKGLLWLS DWMNQLENRQ TRRYPRV

Sequence ? help Back to Top

Protein Sequence Length: 817 aa Download sequence

MLSSAAHPPQ HLSSDSDSDS SSPSHSHQRH PDLSSSIFQS YLSHSSSRTT TTAADDLHHQ  60
DLIKIQSFLT SSRAGGLSCL ICLERIKPTD PTWSCSSRCF AIFHLLCIQS WAHQSTTLAA  120
SRASARAAVA PDESSLAWPC PKCRVEYLKP QTPKNYYCFC GKVEDPPRDP WVLPHSCGEI  180
CGRSLKYDCG HFCLLLCHPG PCPACPKLVK NRCFCGKLED VRRCGLKEFS CKGVCGKGLE  240
CGAHRCGEIC HDGSCQPCRV KGSFRCQCGK EEMVRECCER EFRCNGECKK MLSCGRHVCE  300
KGCHEGGCGE CPFQGKRSCP CGKRVYEGMA CDVSLPLCGS TCNKLLSCGF HRCPERCHHG  360
PCVENCRMIV TKPCSVSLGI VVGMLVSAAA AMGTALLAQR YVTGSSGVEI TSAQLHVIGN  420
SVAIVLCNVW TRGSFVEPYR GACAPCPLMV RISCACGNTH FEVPCGTETE QKPPKCHKPC  480
PVAPLCRHAP QSKPHRCHYG ACPPCRLTCG ERYSCGHECQ LRCHGPVPPP RPEFTLKPKK  540
KKGNYLSEAT PGSPCPPCPE VVLRSCFGRH IGAERMDRDP KCPHPCPMRC HPGECPPCKT  600
LIKRSCHCGS MVHVFECKYY NCLSQKEQMV VRSCKGPCHR KLPNCTHLCP ETCHPGPCPS  660
PDKCSKKVTV RCGCQTLKKE WLCKDVQAAH ISSGCDPKEI PKNQFGVGLL PCGSDCKSKV  720
KALDSELHLR QVKPQEEKES DKASNVSKRR RRRQRVHEEE NASRLQRIVG VARRILLVLI  780
VVAAVVVSAY FGYKGLLWLS DWMNQLENRQ TRRYPRV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	748	753	KRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein