PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY43292.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 653aa    MW: 73168.4 Da    PI: 5.8028
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY43292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS350.13.6e-1072796501374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL  cA+av+ +d + a+ +L++++++a+p+gd mqRla yf+ +L+ar+a+ ++ +y   p+ +ts    +++l a++++  ++P+ k+s + aN
  TEY43292.1 279 LRTLLNLCAQAVAVDDRRTANDYLSQIRQHATPTGDGMQRLAYYFADGLEARMAGCGDLTYGRAPTLPTS---AADVLRAYHILIATCPYRKISDFFAN 374
                 578999*************************************************9999**999999998...9************************* PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 ++I++  e+ +++Hi+Df+i +G+QWp+++q L++Rp+gpp+lRiTg++ p +g   + ++eetg+rL+++Ae++gvpfefn+ ++k++e+++l +L +
  TEY43292.1 375 KTIMDVSERVTKLHIVDFGILYGFQWPSFMQRLSTRPGGPPRLRITGIDLPCPGfrPSARVEETGRRLSSYAETFGVPFEFNA-ITKSWETIKLGDLTI 472
                 ***************************************************99999***************************.79************* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +++E laV+++ +  +lldesv ++s+r+ vL+l+++++P v+v    + +++ + F +rf ea+ ++s+lfd+l++++pre +er+ +E+ ++g+ +v
  TEY43292.1 473 EKDELLAVSCINKFSSLLDESVLVNSPRNIVLNLIRKMNPGVFVQGAVNGSYGVPFFITRFREAMFHFSSLFDMLDTTIPREIHERMLLEKIVFGQGVV 571
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nv++cega+r+ r et+++W+ r ++aGF ++pl+ +++k ak  ++  + + + ++ + +++++gWk+r ++++S+Wr
  TEY43292.1 572 NVLSCEGADRVDRPETYKQWQIRNTRAGFVQLPLDREIVKMAKKRVKSSYHKDFVIDVDGQWMLQGWKGRIIYALSSWR 650
                 **************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    
MRSNQEGLHV FPMPNMINDL RISDMFSNGN IADNSRHVSN KFSLDTRRQQ SPEDTDFSDD  60
VPKFINHILM EEEVEYEVLG EHYPAPNSDQ GVDYDPSDVE SFSGDWFYDP SFSGYNGHDI  120
TVNDPHSTCR SLYSTSSSNA NLAEGPFSSP VSPLKISDAF SEQESAMQFK KAAEEANKFL  180
DCGSNLILSM KNDDIPRGKK NPHRETLGSQ EERSSKQSAV SSDAAVSDDM FDKVLLCSGG  240
KNESALRKEL SEATKATPQE DHSNVGSKKK GDGTSVVDLR TLLNLCAQAV AVDDRRTAND  300
YLSQIRQHAT PTGDGMQRLA YYFADGLEAR MAGCGDLTYG RAPTLPTSAA DVLRAYHILI  360
ATCPYRKISD FFANKTIMDV SERVTKLHIV DFGILYGFQW PSFMQRLSTR PGGPPRLRIT  420
GIDLPCPGFR PSARVEETGR RLSSYAETFG VPFEFNAITK SWETIKLGDL TIEKDELLAV  480
SCINKFSSLL DESVLVNSPR NIVLNLIRKM NPGVFVQGAV NGSYGVPFFI TRFREAMFHF  540
SSLFDMLDTT IPREIHERML LEKIVFGQGV VNVLSCEGAD RVDRPETYKQ WQIRNTRAGF  600
VQLPLDREIV KMAKKRVKSS YHKDFVIDVD GQWMLQGWKG RIIYALSSWR PAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-167GRAS family protein