PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43324.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

WOX

Protein Properties

Length: 156aa MW: 17898.2 Da PI: 9.4187

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	63.9	2.2e-20	23	84	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t eq+++L elF++ r+p+++++++++++l +++ ++V++WFqN++a++++ TEY43324.1 23 KCGRWNPTGEQVKVLTELFKSgLRTPTTDQIQKISAELsfygKIESKNVFYWFQNHKARDRQ 84 568***************99***********************************996 PP
2	Wus_type_Homeobox	113.8	8.7e-37	23	86	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt eQ+k+L+el+ksGlrtP++++iq+i+aeL+ yGkie+kNVfyWFQN+kaR+rqk+ TEY43324.1 23 KCGRWNPTGEQVKVLTELFKSGLRTPTTDQIQKISAELSFYGKIESKNVFYWFQNHKARDRQKR 86 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MDEYSTGFCI RTAAARGGGT GSKCGRWNPT GEQVKVLTEL FKSGLRTPTT DQIQKISAEL 60 SFYGKIESKN VFYWFQNHKA RDRQKRRRIS VDDLPTTPTP SKQFGSAEKN EAERVIETLQ 120 LFPVKSRLYA DDWKENSYNH AMEMDHPTLD LRLSFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	82	88	DRQKRRR
2	85	89	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-51	WOX family protein