PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY43351.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family LBD
Protein Properties Length: 157aa    MW: 17846.5 Da    PI: 6.706
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY43351.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260130.28.8e-4111109199
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +CaaCk+l+r+C+++C +apyf +++pkkfa vhk+FGasnv+k+l+++pee+reda++slv+eAe+r++dPvyG++g i +lq+++ +l+++l l+++
  TEY43351.1  11 SCAACKFLKRRCTPNCQFAPYFRSDEPKKFAKVHKVFGASNVSKILNEVPEEHREDAVNSLVFEAEVRLQDPVYGCIGAIASLQHKMVELQHDLFLARS 109
                 6*******************************************************************************************9988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MKSQEPRSSS SCAACKFLKR RCTPNCQFAP YFRSDEPKKF AKVHKVFGAS NVSKILNEVP  60
EEHREDAVNS LVFEAEVRLQ DPVYGCIGAI ASLQHKMVEL QHDLFLARSR LACFLDHQPP  120
PPGPFFDDMP PLFEPPVPDL FDHPTLPLDH FAPFHYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11090.13e-61LBD family protein