PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43366.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 198aa MW: 22920.8 Da PI: 7.723

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43366.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.8	1.2e-08	10	57	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 + rWT eE + a +++ + +W +Ia++++ +++ +++++ + + TEY43366.1 10 KSRWTNEENRTFESALALFEEEspeRWFKIAAMIP-TKSVYDVIDQYTQ 57 68****************99*********.******99976 PP
2	Myb_DNA-binding	43.1	9.7e-14	94	139	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++WT+ E+ +++ + +++G+g+Wk I+r + +t+ q+ s+ qky TEY43366.1 94 LPWTESEHRRFLLGLEKHGKGDWKNISRNFVVSKTPTQVASHAQKY 139 69***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MCVKNMMSMK SRWTNEENRT FESALALFEE ESPERWFKIA AMIPTKSVYD VIDQYTQLVS 60 DVSDIEAGLV PIPAYLSFNL SPNRSSPSHR KKGLPWTESE HRRFLLGLEK HGKGDWKNIS 120 RNFVVSKTPT QVASHAQKYY MRQLNGDKDK RRPSIHDISI HLTGDSQCFH DYNNQGDLMM 180 LFDSGYSHGY PYTDSLYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	4e-73	MYB family protein