PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43509.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 154aa MW: 16620.6 Da PI: 6.4943

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	132.6	1.6e-41	14	112	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C ++C++apyfp e+p kf nvhk+FGasnv+kll+++p +reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l+ el+++++ TEY43509.1 14 PCAACKFLRRRCLSGCIFAPYFPPEEPTKFVNVHKIFGASNVSKLLNEIPAYQREDAVNSLTYEAEARLKDPVYGCVGAITILQRQVFTLQRELDATNA 112 7*********************************************************************************************99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MAASSSSSSY SNPPCAACKF LRRRCLSGCI FAPYFPPEEP TKFVNVHKIF GASNVSKLLN 60 EIPAYQREDA VNSLTYEAEA RLKDPVYGCV GAITILQRQV FTLQRELDAT NADIMRFASG 120 TGAPADDPRG SGSGYADPNS TDYWTGKGQD HGGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27650.1	1e-64	LBD family protein