PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY43905.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 197aa MW: 21331.2 Da PI: 8.0324

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY43905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	67	89	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+Fs+ L H +H TEY43905.1 67 YQCKTCSKCFSSFQALGGHRASH 89 9***********99999998887 PP
2	zf-C2H2	11.3	0.001	120	142	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H TEY43905.1 120 HECSICGAEFGSGQALGGHMRRH 142 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MLQEVSTMMK GKRSKQPRSA SPLSVISDVS PSHSAHDEEE EEEMANCLIL LAKGRSSPPP 60 PPAEEAYQCK TCSKCFSSFQ ALGGHRASHK KPLMDDTTNL SLQISSSCRS ASSPSKARVH 120 ECSICGAEFG SGQALGGHMR RHRPIPANHG VKKAKNLLSL DLNLPAPEDD QPESKFPFAA 180 KEQVIVFAAS PLIHCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	1e-39	C2H2 family protein