PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY44188.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

LBD

Protein Properties

Length: 183aa MW: 20171.1 Da PI: 5.7842

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY44188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	138.8	1.8e-43	30	129	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++kll++lpe++r da++s+vyeA+ar+rdPvyG++gvi +lq+q+++l+aela++++ TEY44188.1 30 PCAACKILRRRCVDKCVLAPYFPPTDPLKFTIAHRVFGASNIIKLLQELPEDQRADAVNSMVYEANARLRDPVYGCAGVICHLQKQINELQAELAKAQA 128 7***********************************************************************************************998 PP DUF260 100 e 100 e TEY44188.1 129 E 129 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MGYSGNTSAN ASPPSSSSSP PSSPPVVLSP CAACKILRRR CVDKCVLAPY FPPTDPLKFT 60 IAHRVFGASN IIKLLQELPE DQRADAVNSM VYEANARLRD PVYGCAGVIC HLQKQINELQ 120 AELAKAQAEV MNMQCQNSNL FELICKQMSS AKNEEENLQP FRDNSAFLLD ERVLGVAWEP 180 LWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	8e-69	LBD family protein